PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC040884.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 378aa    MW: 42204.1 Da    PI: 6.5578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC040884.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.4e-12172218455
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    h  +Er+RR++i +++  L  ++P++     kK++Ka+iLe A+e++k+Lq
  EcC040884.10 172 EHVLAERKRREKISKRLIALSAIIPNL-----KKMDKASILEDAIEHLKELQ 218
                   6899***********************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.574168217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-16172231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-10172218IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-16173230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.66E-14173219No hitNo description
SMARTSM003539.2E-14174223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MEILSPRVFP QMVEDAAYFH HHHHQQQANS PFSFDDEFDL FHPSFHSEPC STSSPSHLVP  60
LVSRETMPSF AAPSIEAPRE LTERPWKKLK TERWNSLGAP AHETMTRKVV ISPSPSPSRS  120
LSPDSHLISF GNPDSSPAIS NPIHGTYEIQ DCEGPKTKNT SLASRTPVHA QEHVLAERKR  180
REKISKRLIA LSAIIPNLKK MDKASILEDA IEHLKELQQR VKALEEEAAA AKAVESVVVV  240
KKSQLTTDDD TYSSSDEQSC SQIDRQLSLP EIEARVSGNC VLIKIHCERR NGSVSKMIGE  300
IEELNLTVVN SCIMPFGSSI LDVTILAQVN IYGTQISSIF FPGFNTILFF FREILDAEIN  360
LTKITKLIMH LTHGTPLI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176181ERKRRE
2177182RKRREK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010023397.10.0PREDICTED: transcription factor bHLH19-like
TrEMBLA0A059B1570.0A0A059B157_EUCGR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM49227146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22750.12e-38bHLH family protein